Annabi Isa (AS) yana da mu'ujizai da yawa. Waɗannan mu’ujizai alamun annabci ne da kuma dangantakarsu da Allah domin mutane su gaskata da Allah ta wurin ganinsu.
Mu'ujiza ta farko ta Yesu Almasihu (A.S) ita ce haihuwarsa. Kamar yadda Alkur’ani ya ce, Maryam (A.S) ta samu ciki da yardar Allah, ba tare da ta yi aure ba, ba ta da alaka da namiji. Kamar yadda ya zo a cikin Kur’ani, haihuwar Yesu Kiristi ta wannan hanya alama ce ga mutane kuma rahama ce daga Allah (Maryam/21).
Mu'ujiza ta biyu ta Annabi Isa (AS) ita ce lokacin da ya yi magana bayan an haife shi kuma a cikin zanen goyo yana jariri yana cewa: "Ni bawan Allah ne wanda ya ba ni littafi kuma ya sanya ni Annabi" (Maryam/30) .